On the construction of a ground truth framework for evaluating voxel-based diffusion tensor MRI analysis methods

نویسندگان

  • Wim Van Hecke
  • Jan Sijbers
  • Steve De Backer
  • Dirk H. J. Poot
  • Paul M. Parizel
  • Alexander Leemans
چکیده

Although many studies are starting to use voxel-based analysis (VBA) methods to compare diffusion tensor images between healthy and diseased subjects, it has been demonstrated that VBA results depend heavily on parameter settings and implementation strategies, such as the applied coregistration technique, smoothing kernel width, statistical analysis, etc. In order to investigate the effect of different parameter settings and implementations on the accuracy and precision of the VBA results quantitatively, ground truth knowledge regarding the underlying microstructural alterations is required. To address the lack of such a gold standard, simulated diffusion tensor data sets are developed, which can model an array of anomalies in the diffusion properties of a predefined location. These data sets can be employed to evaluate the numerous parameters that characterize the pipeline of a VBA algorithm and to compare the accuracy, precision, and reproducibility of different post-processing approaches quantitatively. We are convinced that the use of these simulated data sets can improve the understanding of how different diffusion tensor image post-processing techniques affect the outcome of VBA. In turn, this may possibly lead to a more standardized and reliable evaluation of diffusion tensor data sets of large study groups with a wide range of white matter altering pathologies. The simulated DTI data sets will be made available online (http://www.dti.ua.ac.be).

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Determination of Fiber Direction in High Angular Resolution Diffusion Images using Spherical Harmonics Functions and Wiener Filter

Diffusion tensor imaging (DTI) MRI is a noninvasive imaging method of the cerebral tissues whose fibers directions are not evaluated correctly in the regions of the crossing fibers. For the same reason the high angular resolution diffusion images (HARDI) are used for estimation of the fiber direction in each voxel. One of the main methods to specify the direction of fibers is usage of the spher...

متن کامل

Diffusion Tensor Imaging: Evaluation of Tractography Algorithm Performance Using Ground Truth Phantoms

(Abstract) Diffusion Tensor Magnetic Resonance Imaging (DT-MRI), also known as Diffusion Tensor Imaging (DTI), is a unique medical imaging modality that provides non-invasive estimates of White Matter (WM) connectivity based on local principal directions of anisotropic water diffusion. DTI tractography estimates are a macroscopically sampled description of underlying microscopic structure, and ...

متن کامل

Joint Fractional Segmentation and Multi-tensor Estimation in Diffusion MRI

In this paper we present a novel Bayesian approach for fractional segmentation of white matter tracts and simultaneous estimation of a multi-tensor diffusion model. Our model consists of several white matter tracts, each with a corresponding weight and tensor compartment in each voxel. By incorporating a prior that assumes the tensor fields inside each tract are spatially correlated, we are abl...

متن کامل

Segmentation of thalamus from MR images via task-driven dictionary learning

Automatic thalamus segmentation is useful to track changes in thalamic volume over time. In this work, we introduce a task-driven dictionary learning framework to find the optimal dictionary given a set of eleven features obtained from T1-weighted MRI and diffusion tensor imaging. In this dictionary learning framework, a linear classifier is designed concurrently to classify voxels as belonging...

متن کامل

Development of partial volume segmentation of brain tissue based on diffusion tensor imaging (DTI)

Introduction To study the cortical/subcortical diffusivity quantified by the apparent diffusion coefficient (ADC) in neurological and neurodegenerative diseases, brain tissue segmentation methods for diffusion tensor magnetic resonance imaging (DT-MRI) data have been proposed, which utilize registration between segmented structural MRI and DT-MRI [1-3]. Recently, another method has been propose...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • NeuroImage

دوره 46 3  شماره 

صفحات  -

تاریخ انتشار 2009